CDS

Accession Number TCMCG081C18173
gbkey CDS
Protein Id XP_010655352.1
Location join(208985..208999,209090..209269,209347..209610,209881..210111,210494..210554,210953..211029,211194..211451,212328..212417,213315..213449,215876..216025,217065..217168,217728..217781,217910..218000,218926..219003,219100..219250,219331..219428)
Gene LOC100247070
GeneID 100247070
Organism Vitis vinifera

Protein

Length 678aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_010657050.2
Definition PREDICTED: tyrosyl-DNA phosphodiesterase 1 isoform X1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category L
Description Tyrosyl-DNA phosphodiesterase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10862        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000012        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008081        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0017005        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070259        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCTATCTCAGATTGGATTCTTGGTTCCACTCAATCGCAATCTAGAAGAAGACACTTCAACCCCAAAATTACCCATTCCCACTGGCGCCAATGTCATCGGCCGGAATAGCATCTCCGTCTCCGACAAGAGGCTGAGCCGCAAGCATCTCACCTTAATCGCCTCCGGAAATGGTTCCGTCGATGCCGTCGTGGAGGGGACGAACCCAGTTGTTGTGGCATCTGGGAATCAAAGGAAGAAGCTGCGAACTGGGGAGAAAGCGGTAATTACCAATGATGATATTATAGAGTTGATCCCTGGACATTACTTCTTTAAGTATGTAACAGTGGCTGGTGAGAAATGTGAGAAAAAAGGGAATTCCATGGATGCACAGAATATGGAATCAAATGAAGTCAGTCTAAGTCGGAAGCGAATGCGACAAGTATCTGAGGACGAGGCTTTTGCAAGGAAATTACAGGCTGAGATGGAAAATGATGTCCTTGTACAGGAGAGGTCTTTGGTGACCGGAAAGTCTGGCTACTCGCAGGCTAGTACAGCAAGTATTCCATCTTCCCACATGAACTCAGAGGCCATTCGTCATTTTAGTATTCCTAAAGATAATTTACCTTTAACCTATCGGCTTTTGCGAGTGAAAGATCTGCCTGCATGGGCAAATACATCTTCTGTTTCTATAAGGGATGTAATTCAGGGGGATGTGCTCATTGCTGTTCTTTCAAACTACATGGTGGACATCGATTGGTTGTTATCTTCTTGTCCAACACTTGCTAAAATCCCTCATGTGTTGGTTATTCATGGAGAGGGTGATGGTACGTTGGATCACATGAAGAAGAACAAACCTCCGAATTGGATTCTGCACAAACCGCCACTACCAATTTCATTTGGAACGCACCATTCGAAGGCCATGCTTCTTGTCTATCCTCGAGGAGTGAGAGTTATTGTACATACAGCAAATTTAATATATGTTGACTGGAACAACAAAAGCCAAGGTTTATGGATGCAAGATTTCCCTTGGAAGGTCCAAAAAGAACTGAGTAAAGGATGTGCATTTGAAAATGATCTGATTGATTATCTGAGTGTATTGAAGTGGCCAGAATTCACCGCTAATTTACCAGCTCTTGGCAGCTTCAATATCAATTCATCCTTTTTCAAGAAATTCGATTACAGCAATGCAGTGGTCAGACTAATTGCATCTGTCCCTGGTTATCACACGGGTTCCAATCTGAAAAAGTGGGGACATATGAAGCTCTGCAGTGTTCTACAGGAGTGTATTTTTGACAAAGAGTTTCAGAAATCTCCCCTTGCTTATCAGTTCTCTTCCCTTGGTTCTTTGGACGAGAAGTGGATGACTGAACTAGCATCCTCAATGTCATCAGGTTCCTGTGATGATAAAACACCTCTTGGTTTAGGCAAACCCCTCATAATATGGCCTACCGTGGAAGATGTCAGATGCTCTTTGGAGGGTTATGCAGCTGGAAATGCAATTCCAAGTCCACAAAAAAATGTGGAGAAAGAATTCTTGAAGAAGTATTGGGCAAAATGGAAGGCAACCCACACTGGTCGCTGTCGTGCAATGCCTCATATAAAGACGTACACCCGTTATAATGGTCAAAACCTTGCTTGGTTCTTGTTAACTTCAGCAAATCTCAGCAAAGCAGCCTGGGGAGCACTCCAGAAGAACAATTCCCAATTGATGATCCGTTCCTATGAGCTGGGAGTACTATTTTTACCATCTCCCATCAACCGTGGTCAGGGATTCTCTTGTACAGACAATGGTAGTCCATCAAAGAATAAATGTGGCTTGTCAGAAAACACAAAATCGCAGAGAACAAAACTGGTGACTCTGACCTGGGAAGGAAACAGAAGTTCAGATTCATCTTCTGAAGTAATTCCATTGCCTGTGCCATACGAACTCCCTCCAAAGCAGTACTCCTCTGAAGATGTTCCCTGGTCTTGGGACAGGCGATACTACAAGAAGGATGTTTGTGGTCAAGTTTGGCCAAGACACGTTCAGCTGTACAGTTCCCCAGATTCCTAA
Protein:  
MSLSQIGFLVPLNRNLEEDTSTPKLPIPTGANVIGRNSISVSDKRLSRKHLTLIASGNGSVDAVVEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVAGEKCEKKGNSMDAQNMESNEVSLSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQASTASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIAVLSNYMVDIDWLLSSCPTLAKIPHVLVIHGEGDGTLDHMKKNKPPNWILHKPPLPISFGTHHSKAMLLVYPRGVRVIVHTANLIYVDWNNKSQGLWMQDFPWKVQKELSKGCAFENDLIDYLSVLKWPEFTANLPALGSFNINSSFFKKFDYSNAVVRLIASVPGYHTGSNLKKWGHMKLCSVLQECIFDKEFQKSPLAYQFSSLGSLDEKWMTELASSMSSGSCDDKTPLGLGKPLIIWPTVEDVRCSLEGYAAGNAIPSPQKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTYTRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPSPINRGQGFSCTDNGSPSKNKCGLSENTKSQRTKLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHVQLYSSPDS